Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015887596.1_cds_XP_016441990.1_37298
CDS Infomation

[gene=LOC107767494] [db_xref=GeneID:107767494] [protein=3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic-like] [protein_id=XP_016441990.1] [location=join(17462..17615,18795..19141,19851..20282,20407..20580,20893..21006,21471..21572,21665..21731,22551..22618)] [gbkey=CDS]
Sequence

ATGACTAGTATTACTGGTACTGGTTATTCTTCTGGTTTGATTTTAAAGCAGAGAGAATTA
GGGATAAAAGGGAATTCTTTGTTCCAATACAATGGGCTTAGAACAATAGAAAACATGAAA
ATGCCAGTGGGGTTTATTTCCTGGAAGCCAAAAGCTGTAAAATGTGGAAGAATCAGGGCC
ATGGCTTCAGCTCCCAAAAGAGAAAAGGACCCAAAGAAAAGGATTGTTGTAACTGGAATG
GGCCTTGTTTCAGTCTTTGGAAGTGATATTGACAATTTCTATAATAGTCTGCTTGAGGGA
CAGAGTGGAATCACTTTGATCGACAGATTTGATGCATCGAATTACTCCGTTAGGTTTGCA
GGACAGATTCGTGATTTCTCCTCTGTAGACTACATAGACGGGAAGAATGATCGTCGTCTG
GATGACTGTTGGAGGTACTGTCTCGTCGCTGGCAAGAAGGCCCTTGATGATGCTAACCTT
GGTCAAGAAGTTCTTGAAGCTATGGACAAAACAAGAATCGGCGTCTTAGTTGGAACTGGA
ATGGGAGGATTAACAGCTTTTAGCAGTGGAGTGGAATCCTTAGTTCAGAAAGGATACAAG
AAAATCAGTCCATTTTTCATCCCTTACTCTATCACCAATATGGGATCAGCATTGTTAGCT
ATAGGTACCGGACTAATGGGACCTAATTATTCCATTTCAACGGCTTGTGCAACTGCAAAC
TACTGCTTCTATGCTGCTGCAAATCACATTAGAAGGGGTGAAGCTGATATTATGGTAGCA
GGTGGGACGGAAGCTGCAATCGTGCCTACTGGTGTTGGCGGCTTCATAGCTTGTCGCGCC
TTATCTCAAAGAAATGATGAACCACATAAGGCGTCAAGGCCGTGGGACAAGAATCGTGAT
GGTTTTGTCATGGGCGAAGGTTCTGGTGTCCTGGTAATGGAAAGTTTGGAGCATGCGTTG
AAAAGAGGTGCTAATATTATAGCAGAATACTTGGGAGGAGCTGTTACTTGTGATGCTCAT
CACATGACTGATCCTCGTTCCGATGGGCTTGGAGTTTCATCTTGCATAACCAAAAGTTTG
GAAGATTCTGGCATTTCTCCTGAAGAGGTGAATTACATTAACGCGCATGCAACATCAACC
CTTGCTGGAGATTTGGCAGAGGTCAATGCAATCAAGAAGGTTTTTAAGGATACTTCAGAG
ATTAAGATGAACGGAACAAAGTCAATGATTGGGCATGGACTCGGGGCCGCTGGTGGACTT
GAAGCGATTGCAACGATCAAAGCAATAACAACTGGTTGGCTACATCCAACTATTAACCAA
GATGATTTGGAACCTCAGGTTACGATAGACACTGTTCCAAATGTGAAGAAACAACATGAA
GTGAATGTTGGTATTTCCAATTCATTTGGATTTGGAGGGCATAATTCAGTGGTTGTTTTC
GCGCCTTACAATCCTTAA

Peptide Sequence

PEP ID

XP_016441990.1
PEP Infomation

PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic-like [Nicotiana tabacum]
Sequence

MTSITGTGYSSGLILKQRELGIKGNSLFQYNGLRTIENMKMPVGFISWKPKAVKCGRIRA
MASAPKREKDPKKRIVVTGMGLVSVFGSDIDNFYNSLLEGQSGITLIDRFDASNYSVRFA
GQIRDFSSVDYIDGKNDRRLDDCWRYCLVAGKKALDDANLGQEVLEAMDKTRIGVLVGTG
MGGLTAFSSGVESLVQKGYKKISPFFIPYSITNMGSALLAIGTGLMGPNYSISTACATAN
YCFYAAANHIRRGEADIMVAGGTEAAIVPTGVGGFIACRALSQRNDEPHKASRPWDKNRD
GFVMGEGSGVLVMESLEHALKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCITKSL
EDSGISPEEVNYINAHATSTLAGDLAEVNAIKKVFKDTSEIKMNGTKSMIGHGLGAAGGL
EAIATIKAITTGWLHPTINQDDLEPQVTIDTVPNVKKQHEVNVGISNSFGFGGHNSVVVF
APYNP

Transcript Sequence

Gene sequence data has not been registered.